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Written by
Fernando Camargo
Data Scientist @ Amalgam
Machine Learning Reproducibility: A Kaggle Competition Use-Case16 December, 2020

Even though Reproducibility in Machine Learning is a theme that people hear about now and then, we still see that people are practicing it only to a certain degree. Even between Kaggle [https://www.kaggle.com/] competition winners, we still see a lot of hard-to-reproduce code in Notebooks. Our goal here is to outline some reproducibility elements and how we tackled them in a recent competition. First, what reproducibility stands for in Machine Learning? During a Machine Learning project, we hav

The path to putting your ML model in production24 November, 2020

Suppose you are a Data Scientist or Machine Learning Engineer (or another role name of this kind). You took your time to analyze your dataset, clean it, and prepare it to train your model. You then prepared many model candidates using the most recent techniques and took your time to fine-tune them. After all this extensive work, you finally created a model to be proud of. You finally finished your job. Well, unfortunately, not. If your model never goes live and is actively used, delivering value

Ranking labs-of-origin for genetically engineered DNA using Metric Learning23 October, 2020

With the constant advancements of genetic engineering, a common concern is to be able to identify the lab-of-origin of genetically engineered DNA sequences. For that reason, AltLabs has hosted the Genetic Engineering Attribution Challenge to gather many teams to propose new tools to solve this problem. Here we show our proposed method that aims to rank the most likely labs-of-origin and generate embeddings for DNA sequences and labs. These embeddings can also be used to perform various other tas

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